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SRX004423: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-2248' containing sample 'BROAD:SEQUENCING_SAMPLE:17318.0'
1 LS454 (454 GS FLX) run: 283,996 spots, 86M bases, 166.9Mb downloads

UUID: 563225ba-67ea-4c5a-85b8-94e838d7cf97
Design: 15X fragment; 30X physical paired
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA38347 • SRP001763 • All experiments • All runs
show Abstracthide Abstract
<b><i>Bacteroides</i> sp. 2_1_16 </b>. This strain is from the human gastrointestinal tract. This genome will be used for comparative analysis.
Sample: Generic sample from Bacteroides sp. 2_1_16
SAMN00102982 • SRS002818 • All experiments • All runs
Organism: Bacteroides fragilis
Library:
Name: 454-2248
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
AACGGAGTC
14  forward           reverse

Experiment attributes: (show all 6 attributes...) (hide...)
analysis_type: Assembly
gssr_id: 17318.2
lsid: BROAD:SEQUENCING_SAMPLE:17318.2
material_type: Genomic DNA
project: G1858
work_request: 18162
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-02-23 14:03:45.0454BaseCaller2.0.00.17
Runs: 1 run, 283,996 spots, 86M bases, 166.9Mb
Run# of Spots# of BasesSizePublished
SRR015862283,99686M166.9Mb2009-05-13

ID:
4679

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